<* $Id: xnd_r11h.html,v 1.1.1.1 1999/07/31 10:47:00 berar Exp $ *> xnd 1.1 input file

xnd 1.1 : input file


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Coordinates file header

The file will contain the following parameters which are listed in the tables.

Title and output info

Titlestitle of the refinementup to the end of the line
ListNamesname of the listing file (eg xnd.lst)up to the end of the line

Number of cycles

The values, in the following tables, describe the refinement procedure and the structure of the file. It is possible to introduce comments in this table. Such comments always begin with '#' and continue up to the end of the line.
For normal case, there is only one value to read here. The others are test values just listed for information.
nCyclednumber of cycles to perform
if negative, the program enters in test_mode and may requires some others data according to the value of Test_Mode =- nCycle
nCycledreal number of cycles to perform
assym_rminfTest_Mode&0x08!=0limit of convolution : w < assym_rmin * w_conv
assym_rmaxfTest_Mode&0x08!=0limit of convolution : w_conv < assym_rmax * w
assym_resoldTest_Mode&0x08!=0resolution for convolution
assym_widthdTest_Mode&0x08!=0width for convolution
bragg_repartfTest_Mode&0x10!=0weighting scheme use for R_Bragg

Basic and refinement info

The values, in the following tables, describe the refinement procedure and the structure of the file. It is possible to introduce comments in this table. Such comments always begin with '#' and continue up to the end of the line.
nSymdnumber of symmetry tables to be read in xnd.k (excluding tables defined in xnd_sym.d.)
nAnodnumber of tables of anomalous scattering factors to be read
nDifdnumber of the scattering tables to be read in xnd.k (excluding tables defined in xnd_dif.d.)
nExperd>0number of experiments
nPhased>0number of phases
EpsStopf>0the refinement stops if the variation of the refined parameters is lesser than the product of EpsStop and their e.s.d.
EpsProff>0the reflection is calculated in the region where
(Y_cal(i)-Y_bkg(i)) > EpsProf sigma(Y_obs(min))
Stabilisefdamping factor

Method info

Methodd0full-matrix least square refinement
+1linear
+2weight taken on calculated rather than from observed profile
+4(reserved to take care of local correlations)
+8(reserved for ponderation ascheme calculating weights on the intensity exceeding bakground level).
BkGroundd0linear interpolation
1spline
2(reserved for) polynomial expansion
MaxAssymd>0assymetry expansion on odd derivatives of gaussian
<0same expansion but coefs are those of polynome and not of the derivative
=0instrumental uses H/L and S/L convolution and power adjustment for phases
Profild0pseudo-Voigt (ref)
1Voigt
MaxOrderdmaximum number of terms in the polynome (Temp) expansion
ValidRefd0 no interpretation of refinement codes
2-9alternate refinement

Printing codes

PrtSymd0symmetry operations not printed in the listing file
+1symmetry operations explicitely read in xnd.k file are printed in the listing file
+2symmetry operations read in xnd_sym.d file are printed in the listing file
PrtDifd0diffusion factors tables not printed in the listing file
+1scattering factors tables read in xnd.k file are printed in the listing file
+2scattering factors tables read in xnd_dif.d file are printed in the listing file
+4scattering factors tables are always printed in the listing file
PrtCord0correlation matrix not printed in the listing file
1the whole correlation matrix is printed at the last cycle
2-9correlation matrix elements greater than 20-90% are printed

Files definition

PrtNewd0 no actualized copy of the xnd.k file and no NewName to read
>0creates the n+1 actualized copy of xnd.k
<0no copy of xnd.k but NewName has to be read
NewNamesname of the actualized file (eg xnd.new)
PrtHKld0no print of the hkl summary and no HklName to read
1prints the hkl summary at the last cycle
+2additional print of all the neglected reflections in the listing file
+4additional print of all the null reflections in the listing file
+8don't sort lines by increasing 2theta values
+128additional print of all the reflections in the listing file
<0no file but HklName has to be read
HklNamesname of the file containing the hkl summary (eg xnd.hkl)
PrtProfd0no print of the file displaying the calculated profile
1prints the file displaying the calculated profile at the last cycle
-1no file but ProfName has to be read
ProfNamesname of the profile file (eg xnd.plg)

Other files information

Disk_DyDpd0automatic dimension of the points and of the derivatives matrix
ndimension charged into memory
DiskDatad0data file is saved in a binary temporary file
1data file is saved in a binary permanent file
2data file is read from a binary file; then the binary file is destroyed
3data file is read from a binary permanent file
DataNamedname of the binary file containing data information
DiskPathd0standard path to xnd_dif.d, xnd_sym.d and temporary files
+1explicit definition of the path to xnd_dif.d, xnd_sym.d
+2explicit definition of the path to temporary files
PathNamed path to xnd_dif.d, xnd_sym.d
TempNamedpath to temporary files

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JFB Feb 21th, 1999